Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGACCAACTAGGCACAGCTGCAC
.((((((((.(((((((((((&))))))..))))).....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017890
GeneSymbolVPS13B
Binding site7586,7613
Score0.923
Seed1
Au0.515
Energy-21.3
Binding len27
Me-5.036
Phylopstem4.500511538461539
Phylopflank3.19172830625
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure