Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTACTCCAGCCTCCCAAGCAGCTGGGAC
((.((((((((((((((((((&)))))))...))))......))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017890
GeneSymbolVPS13B
Binding site13465,13496
Score0.846
Seed0
Au0.456
Energy-21.0
Binding len31
Me-5.495
Phylopstem-0.15609241481481484
Phylopflank0.16389838728750003
Longest consecutive pairings7
Position of longest consecutive pairings24
Pairings in 3prime end8
Position3UTR
2D Structure