Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACCCATTTCCGGAGCTGCAGG
((((((((.(((......(((&.))).....))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017891
GeneSymbolC1orf159
Binding site1343,1367
Score0.846
Seed1
Au0.471
Energy-21.8
Binding len22
Me-8.108
Phylopstem-0.7851519499999998
Phylopflank0.7835278949999998
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure