Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGATTTCGTTTTCACTGAGAAGGAGGGGACGTACGATGGCAGCTGGGC
.(.(((((((.((((((..((&.)).)))))).))))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017895
GeneSymbolDDX27
Binding site189,239
Score0.923
Seed0
Au0.441
Energy-21.9
Binding len21
Me-8.176
Phylopstem3.2202172857142854
Phylopflank2.6636459512500004
Longest consecutive pairings7
Position of longest consecutive pairings3
Pairings in 3prime end6
PositionCDS
2D Structure