Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGCGGCTGCAGCAGGTGGG
((((.(((((((((((..(((&))).)))))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017898
GeneSymbolMTARC2
Binding site352,374
Score0.846
Seed0
Au0.25
Energy-22.6
Binding len22
Me-8.057
Phylopstem1.6125054181818184
Phylopflank1.8979062112499998
Longest consecutive pairings11
Position of longest consecutive pairings7
Pairings in 3prime end6
PositionCDS
2D Structure