Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGACTTCCCAGCTGTT
..(((((((.((..((.((((&)))).))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017900
GeneSymbolAURKAIP1
Binding site101,120
Score0.846
Seed1
Au0.309
Energy-21.3
Binding len19
Me-8.345
Phylopstem3.1986742857142856
Phylopflank2.5915503837499996
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure