Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAGCTGGAGCTGGAGG
((.(((((.((((((...(((&))))))))).))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017900
GeneSymbolAURKAIP1
Binding site253,272
Score0.846
Seed0
Au0.338
Energy-20.1
Binding len19
Me-6.785
Phylopstem3.758259133333333
Phylopflank2.8135484237500012
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end5
PositionCDS
2D Structure