Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTAAATGCATCTGTGTGCCTTAGGG
.((((((((((((((((.....&.))))).))))))))..))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_017902
GeneSymbolHIF1AN
Binding site6192,6219
Score0.865
Seed1
Au0.529
Energy-19.2
Binding len21
Me-3.793
Phylopstem-0.09628703684210525
Phylopflank-0.04167397874999999
Longest consecutive pairings8
Position of longest consecutive pairings6
Pairings in 3prime end3
Position3UTR
2D Structure