Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCCACATCAGTGCAGCTGTGGCTGTG
..(((((((((((((((....&.))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017902
GeneSymbolHIF1AN
Binding site4916,4944
Score0.846
Seed1
Au0.368
Energy-23.1
Binding len17
Me-4.957
Phylopstem-0.6765248199999999
Phylopflank-0.26115085499999996
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure