Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCTTACAGGTGGGCAGCTGTGAT
((((((((((..(((((((.(&).)))))))....)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017902
GeneSymbolHIF1AN
Binding site2499,2523
Score0.923
Seed1
Au0.456
Energy-22.9
Binding len24
Me-10.109
Phylopstem0.6365591000000002
Phylopflank0.3368889674999999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure