Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATGCAGAGCCGGCAGTGGGTCCGGGACAGCTGCAGG
(((((((((((((((((.(((&))).))))..))))...............))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017905
GeneSymbolTMCO3
Binding site459,498
Score0.846
Seed1
Au0.353
Energy-22.8
Binding len39
Me-3.938
Phylopstem2.550885861764707
Phylopflank3.32088112875
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure