Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCCTCCAGCTGCAGAGCCTTCTCCTGTAAG
(((((((((((((((.(((((&)))))....))))))))).........)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017906
GeneSymbolPAK1IP1
Binding site948,982
Score0.923
Seed1
Au0.544
Energy-20.1
Binding len34
Me-4.171
Phylopstem0.5210552583333333
Phylopflank0.7618192100000001
Longest consecutive pairings9
Position of longest consecutive pairings16
Pairings in 3prime end7
PositionCDS
2D Structure