Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGAGCAGGGTCCGCAGCTAAGGTCCAGCGCGAT
((((((((((((((((..(((&)))..))))...))))))))..........)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001354644
GeneSymbolMME
Binding site118,153
Score0.923
Seed1
Au0.279
Energy-20.0
Binding len35
Me-3.938
Phylopstem-0.04194844482758621
Phylopflank0.19619593000000005
Longest consecutive pairings8
Position of longest consecutive pairings15
Pairings in 3prime end6
Position5UTR
2D Structure