Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCAGAGCCGTGGCC
.....(((((((((.(.(((.&))).).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017909
GeneSymbolRMND1
Binding site139,155
Score0.846
Seed0
Au0.529
Energy-18.2
Binding len16
Me-14.401
Phylopstem-0.27592144444444444
Phylopflank-0.24641508575000004
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure