Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCAGACTGCCGACGCTGCGGG
(((((((..((((.((.((((&))))...)).))))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017910
GeneSymbolTRMT61B
Binding site291,315
Score0.923
Seed1
Au0.412
Energy-21.3
Binding len24
Me-8.164
Phylopstem0.5632122857142857
Phylopflank1.0671600899999998
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure