Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACAGGACGTGATAGGCTGCAT
.((((((((((.((((((((.&))))))))..)))....))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017912
GeneSymbolHERC6
Binding site2916,2941
Score1.0
Seed1
Au0.603
Energy-22.9
Binding len25
Me-7.14
Phylopstem2.0287488042857147
Phylopflank1.144691073625
Longest consecutive pairings8
Position of longest consecutive pairings17
Pairings in 3prime end7
PositionCDS
2D Structure