Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAACAAGTAAATACAACCGTGATAATGAAAAGGTGCAGCTGCT
..(((((((((((((((....&.)))))))................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017915
GeneSymbolPARPBP
Binding site568,613
Score0.923
Seed1
Au0.691
Energy-22.6
Binding len33
Me-4.957
Phylopstem0.8023982161290321
Phylopflank1.5515309637499999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure