Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGAGGACAAATACAACTTGCAGCTGA
...((((((((((((((((((&))))..........))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017916
GeneSymbolPIH1D1
Binding site685,715
Score0.923
Seed0
Au0.456
Energy-22.3
Binding len30
Me-6.515
Phylopstem1.915376068965517
Phylopflank3.1798560780000003
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end8
PositionCDS
2D Structure