Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTACGACGTAGCTGTCAAC
((((((((((.(((((.((((&)))))))))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017916
GeneSymbolPIH1D1
Binding site594,615
Score1.0
Seed1
Au0.441
Energy-22.3
Binding len21
Me-6.762
Phylopstem2.493556181818182
Phylopflank2.6121890865
Longest consecutive pairings16
Position of longest consecutive pairings5
Pairings in 3prime end7
PositionCDS
2D Structure