Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGAATTGCAGCTGCAC
.(((((((((((((.(.....&).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017919
GeneSymbolSTX17
Binding site883,899
Score0.923
Seed1
Au0.441
Energy-21.9
Binding len16
Me-4.529
Phylopstem5.417685384615385
Phylopflank4.64937096375
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure