Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCTGCCGACATTTATTCCTTTTCTGAGCTGCC
..(((((((((((.(((((((&))))))).)))).))................))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017920
GeneSymbolURGCP
Binding site481,518
Score0.846
Seed1
Au0.471
Energy-22.1
Binding len37
Me-5.814
Phylopstem-0.6703173642857142
Phylopflank-0.36996168625000003
Longest consecutive pairings7
Position of longest consecutive pairings30
Pairings in 3prime end7
PositionCDS
2D Structure