Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCGGAGCTGCTGCTGACAGG
(((((((.((((((.(.((((&)))).).)))))).)))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017920
GeneSymbolURGCP
Binding site1941,1964
Score0.923
Seed1
Au0.368
Energy-21.9
Binding len23
Me-6.987
Phylopstem1.2888345
Phylopflank0.658906645
Longest consecutive pairings6
Position of longest consecutive pairings10
Pairings in 3prime end6
PositionCDS
2D Structure