Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCCCATGGCCGCAGTGAGCT
..((.(((((((((((.((((&))))...)))))))))))..)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017920
GeneSymbolURGCP
Binding site2648,2671
Score0.846
Seed0
Au0.426
Energy-21.9
Binding len23
Me-9.076
Phylopstem1.235989752727273
Phylopflank2.71271102675
Longest consecutive pairings11
Position of longest consecutive pairings5
Pairings in 3prime end7
PositionCDS
2D Structure