Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGGCTGCCAGGA
.(((((((..((..........&))..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_017922
GeneSymbolPRPF39
Binding site487,499
Score0.846
Seed1
Au0.618
Energy-15.2
Binding len12
Me-9.207
Phylopstem3.9436938571428577
Phylopflank5.181080370000001
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure