Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GTGCTGGCTGTGGGGA
...((((((((((....(((.&)))..)))))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_017922
GeneSymbolPRPF39
Binding site41,57
Score0.846
Seed0
Au0.294
Energy-21.3
Binding len16
Me-8.34
Phylopstem0.4172395
Phylopflank0.3375644405555555
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure