Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCAGCAGCTGTAT
.(((((((((.(((((.....&))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017926
GeneSymbolGPATCH2L
Binding site2144,2160
Score1.0
Seed1
Au0.574
Energy-22.3
Binding len16
Me-6.618
Phylopstem-0.005354277777777781
Phylopflank0.1430582437500001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure