Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCCCCTGTGCCAGGC
.(((((((((....((((....&))))...))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_017931
GeneSymbolTTC38
Binding site1160,1177
Score0.923
Seed1
Au0.265
Energy-19.0
Binding len17
Me-12.111
Phylopstem3.188573555555555
Phylopflank2.289230339175
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure