Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAAGGCGGGAGCAGCTGCAC
.(((((((((..((((...((&))...))))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017931
GeneSymbolTTC38
Binding site347,368
Score1.0
Seed1
Au0.426
Energy-20.5
Binding len21
Me-9.965
Phylopstem3.598054
Phylopflank2.5361218225
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure