Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGAGCAACCATCTACTTCTTCAGCTGCAAA
(((((((((.((((((..(((&)))..))))))...........))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017934
GeneSymbolPHIP
Binding site4737,4769
Score0.923
Seed1
Au0.618
Energy-22.4
Binding len32
Me-5.18
Phylopstem4.625014444444444
Phylopflank4.1610218575
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure