Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGAGAGAGGCAACCGCGGAGTAGGATGCTCTGCGGG
((((((((((((((((..(((&))).......))))))))))...........)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017938
GeneSymbolTMEM255A
Binding site51,89
Score0.846
Seed1
Au0.294
Energy-21.7
Binding len38
Me-3.938
Phylopstem2.903428333333333
Phylopflank2.1360894462499997
Longest consecutive pairings10
Position of longest consecutive pairings18
Pairings in 3prime end6
Position5UTR
2D Structure