Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATGCTGCAGCTGCTGGCAGGAAGACTCTTCGCAGCTGCAT
.((((((((((((((((..((&))..))))))...................)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017941
GeneSymbolC17orf80
Binding site1509,1549
Score1.0
Seed1
Au0.412
Energy-22.0
Binding len40
Me-3.793
Phylopstem-0.048529942857142884
Phylopflank-0.09177533749999997
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure