Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGTCAGAAAATAATCCAATGAAATAAGCATTGGTTGCCAGGC
.(((((((..((((((..((((&.))))..))))))..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_017944
GeneSymbolUSP47
Binding site6836,6878
Score0.846
Seed1
Au0.632
Energy-24.3
Binding len23
Me-6.092
Phylopstem-0.12108215714285715
Phylopflank-0.06503531250000001
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure