Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCATTTCACAGTTGTAC
.((((((((.((.((((((((&))))))))..)).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001354664
GeneSymbolOPA1
Binding site6202,6224
Score1.0
Seed1
Au0.588
Energy-21.8
Binding len22
Me-6.325
Phylopstem-0.17385632499999998
Phylopflank-0.007028924999999995
Longest consecutive pairings8
Position of longest consecutive pairings14
Pairings in 3prime end8
Position3UTR
2D Structure