Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCAGTATCAGACTGCT
..(((((((...(((((((((&)))))))))...))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001354664
GeneSymbolOPA1
Binding site1861,1882
Score0.846
Seed1
Au0.618
Energy-20.3
Binding len21
Me-12.371
Phylopstem5.734261155555555
Phylopflank5.95687086375
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end8
PositionCDS
2D Structure