Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTCAACCAGCCATGGCTGTT
..(((((((((((((.(((((&)))))))))).))...)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017945
GeneSymbolSLC35A5
Binding site597,620
Score0.808
Seed1
Au0.632
Energy-18.9
Binding len23
Me-5.19
Phylopstem6.190804823529412
Phylopflank4.696998068749998
Longest consecutive pairings10
Position of longest consecutive pairings13
Pairings in 3prime end7
PositionCDS
2D Structure