Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTATACCTACTGTAGCTT
....(((((((((.(((((((&)))).)))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017945
GeneSymbolSLC35A5
Binding site104,124
Score0.846
Seed0
Au0.485
Energy-18.6
Binding len20
Me-10.403
Phylopstem-0.12501842222222223
Phylopflank0.09938267624999991
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure