Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCAGCCGTGGCGGTAC
.(((.(((((((((((.((((&))))))))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017951
GeneSymbolSMPD4
Binding site1328,1348
Score0.923
Seed0
Au0.324
Energy-24.5
Binding len20
Me-7.912
Phylopstem4.298108818181818
Phylopflank1.7774120120000003
Longest consecutive pairings15
Position of longest consecutive pairings5
Pairings in 3prime end7
PositionCDS
2D Structure