Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&TGGGAAGCTGAGGCTGCAGT
.....((((((((((((((..&))))).....))))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_017952
GeneSymbolPTCD3
Binding site4249,4269
Score0.846
Seed0
Au0.397
Energy-23.6
Binding len20
Me-13.666
Phylopstem0.020954526315789465
Phylopflank0.057188640000000034
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure