Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCTGACGGGTCGGCGGGCGGGTTTGTGTGAACAGGCACGCAGCTGCAGA
((((((((((((((((.....&.)))).).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017952
GeneSymbolPTCD3
Binding site66,118
Score1.0
Seed1
Au0.456
Energy-23.5
Binding len20
Me-3.938
Phylopstem-0.17072934999999995
Phylopflank0.009311068749999929
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure