Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGGAAGCTGAGGCTGCAGT
((((((((.(((((...((((&))))....))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017952
GeneSymbolPTCD3
Binding site4246,4269
Score0.923
Seed1
Au0.397
Energy-22.7
Binding len23
Me-5.962
Phylopstem-0.15059737499999998
Phylopflank0.07020655250000007
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure