Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCCACGTTGTATGCGAT
...(.(((((((((((.(((..&))).))))))))))).).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_017953
GeneSymbolZNHIT6
Binding site843,861
Score0.846
Seed0
Au0.574
Energy-17.9
Binding len18
Me-10.634
Phylopstem-0.17242541818181817
Phylopflank0.009090229999999984
Longest consecutive pairings11
Position of longest consecutive pairings3
Pairings in 3prime end5
PositionCDS
2D Structure