Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCAGACAACTGCAGCAGACTCTGCAT
.(((((((((((((((..((.&))..)))))))))))......)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017953
GeneSymbolZNHIT6
Binding site1594,1620
Score0.846
Seed1
Au0.529
Energy-23.7
Binding len26
Me-3.793
Phylopstem0.26358570476190474
Phylopflank0.07494759499999999
Longest consecutive pairings11
Position of longest consecutive pairings11
Pairings in 3prime end5
Position3UTR
2D Structure