Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGGAAAGGAATTGCACTTGGCTGCATTAAATGGACGCTGGGTTA
.((((((((((((((((((((&))))))))..............))))))).............))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_017955
GeneSymbolCDCA4
Binding site2178,2226
Score0.846
Seed1
Au0.5
Energy-28.4
Binding len48
Me-3.793
Phylopstem4.89478000851064
Phylopflank4.723559079999999
Longest consecutive pairings8
Position of longest consecutive pairings40
Pairings in 3prime end8
Position3UTR
2D Structure