Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGTAGAGGACGGTGAGCCGCAGCTGCAT
.(((((((((((((.......&.))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017955
GeneSymbolCDCA4
Binding site1092,1122
Score0.923
Seed1
Au0.471
Energy-26.4
Binding len15
Me-4.762
Phylopstem0.16226167692307697
Phylopflank0.21913151625
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end1
Position3UTR
2D Structure