Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGGGCAGACTGTAGCTGA
...(((((((((((((..(((&)))...)))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017958
GeneSymbolPLEKHB2
Binding site2059,2080
Score0.923
Seed0
Au0.456
Energy-20.0
Binding len21
Me-6.515
Phylopstem-0.14887885714285715
Phylopflank-0.056225106250000004
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure