Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTACAGCAGCATGCT
..((((((((...((((((((&))))))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017964
GeneSymbolSLC30A6
Binding site1290,1308
Score1.0
Seed1
Au0.544
Energy-21.8
Binding len18
Me-12.418
Phylopstem2.7578710999999996
Phylopflank2.5899423937500003
Longest consecutive pairings13
Position of longest consecutive pairings5
Pairings in 3prime end8
PositionCDS
2D Structure