Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGTCACATTGGGGCTTGTTTAGGATTGGAGGGCCAGGTC
(((((((...((((((.((((.&)))))))))).....................))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_017966
GeneSymbolVPS37C
Binding site1871,1910
Score0.846
Seed1
Au0.397
Energy-17.8
Binding len39
Me-8.55
Phylopstem0.9616015714285714
Phylopflank0.618631155
Longest consecutive pairings10
Position of longest consecutive pairings29
Pairings in 3prime end6
Position3UTR
2D Structure