Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCAGGCGCCATGGTCTTCCTCACCGCGCAGCTCTGGCTGCGGA
(((((((((.((((((..(((&.)))..)))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017971
GeneSymbolMRPL20
Binding site63,110
Score0.846
Seed1
Au0.353
Energy-23.1
Binding len23
Me-5.18
Phylopstem-0.385433
Phylopflank-0.05142745874999996
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure