Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCGGGCAAGATGGCAGCGGCGCTGCGC
.((((((.((.(((((.....&.))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017971
GeneSymbolMRPL20
Binding site7,36
Score0.846
Seed1
Au0.323
Energy-20.2
Binding len16
Me-8.932
Phylopstem1.3781171666666667
Phylopflank-0.5417482629166666
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure