Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGCTTACTGTAGCAGCTGTGGA
((((((((((....(((((.(&).)))))....)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017972
GeneSymbolGPATCH2L
Binding site5579,5601
Score0.846
Seed1
Au0.441
Energy-20.8
Binding len22
Me-12.255
Phylopstem-0.08814638000000004
Phylopflank-0.15139958249999996
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure